Crystal structure of NIF3 superfamily protein from Sphaerobacter thermophilus
Michalska, K., Tesar, C., Clancy, S., Otwinowski, Z., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NIF3 protein | 278 | Sphaerobacter thermophilus DSM 20745 | Mutation(s): 0  Gene Names: Sthe_0840 | ||
UniProt | |||||
Find proteins for D1C210 (Sphaerobacter thermophilus (strain DSM 20745 / S 6022)) Explore D1C210  Go to UniProtKB:  D1C210 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D1C210 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ACT Query on ACT | AA [auth F] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
FMT Query on FMT | BA [auth F] G [auth A] I [auth A] J [auth A] K [auth B] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N | |||
CL Query on CL | H [auth A] L [auth B] O [auth B] R [auth C] T [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 187.77 | α = 90 |
b = 96.483 | β = 115.28 |
c = 128.47 | γ = 90 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
MOLREP | phasing |
BUSTER | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |