Download MendeleyCupin 2 conserved barrel domain protein from Leptotrichia buccalis.
Osipiuk, J., Tesar, C., Bearden, J., Joachimiak, A.To be published.
3RNS
Cupin 2 conserved barrel domain protein from Leptotrichia buccalis
- PDB DOI: https://doi.org/10.2210/pdb3RNS/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Leptotrichia buccalis C-1013-b
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-04-22 Released: 2011-05-11
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.07 Å
- R-Value Free: 0.208
- R-Value Work: 0.172
- R-Value Observed: 0.173
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cupin 2 conserved barrel domain protein | 227 | Leptotrichia buccalis C-1013-b | Mutation(s): 0 Gene Names: Lebu_0116 |  | |
UniProt | |||||
Find proteins for C7NCX6 (Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249 / C-1013-b)) Explore C7NCX6 Go to UniProtKB: C7NCX6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C7NCX6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ACT Query on ACT | B [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.07 Å
- R-Value Free: 0.208
- R-Value Work: 0.172
- R-Value Observed: 0.173
- Space Group: P 41 21 2
- Diffraction Data: https://doi.org/10.18430/M33RNS
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 58.684 | α = 90 |
| b = 58.684 | β = 90 |
| c = 143.542 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SBC-Collect | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2011-05-11 Deposition Author(s): Osipiuk, J., Tesar, C., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2011-05-11
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-08
Changes: Refinement description
