Download MendeleyCrystal structure of ethanolamine utilization protein EutJ from Carboxydothermus hydrogenoformans
Chang, C., Tesar, C., Jedrzejczak, R., Kinney, J., Kerfeld, C., Joachimiak, A.To be published.
3H1Q
Crystal structure of ethanolamine utilization protein EutJ from Carboxydothermus hydrogenoformans
- PDB DOI: https://doi.org/10.2210/pdb3H1Q/pdb
- Classification: STRUCTURAL PROTEIN
- Organism(s): Carboxydothermus hydrogenoformans Z-2901
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-04-13 Released: 2009-05-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.278
- R-Value Work: 0.227
- R-Value Observed: 0.229
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ethanolamine utilization protein EutJ | 272 | Carboxydothermus hydrogenoformans Z-2901 | Mutation(s): 0 Gene Names: eutJ, CHY_0686 |  | |
UniProt | |||||
Find proteins for Q3AE93 (Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901)) Explore Q3AE93 Go to UniProtKB: Q3AE93 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q3AE93 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ATP Query on ATP | C [auth A], D [auth B] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.278
- R-Value Work: 0.227
- R-Value Observed: 0.229
- Space Group: P 42 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 128.912 | α = 90 |
| b = 128.912 | β = 90 |
| c = 104.922 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | phasing |
| MLPHARE | phasing |
| DM | model building |
| SHELXD | phasing |
| RESOLVE | model building |
| ARP/wARP | model building |
| Coot | model building |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| DM | phasing |
| RESOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2009-05-19 Deposition Author(s): Chang, C., Tesar, C., Jedrzejczak, R., Kinney, J., Kerfeld, C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2009-05-19
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance
