Download MendeleyCRYSTAL STRUCTURE OF MUTT PROTEIN FROM Methanosarcina mazei Go1
Patskovsky, Y., Romero, R., Gilmore, M., Do, J., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
3GRN
CRYSTAL STRUCTURE OF MUTT PROTEIN FROM Methanosarcina mazei Go1
- PDB DOI: https://doi.org/10.2210/pdb3GRN/pdb
- Classification: HYDROLASE
- Organism(s): Methanosarcina mazei
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-03-26 Released: 2009-04-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.253
- R-Value Work: 0.207
- R-Value Observed: 0.208
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| MutT related protein | 153 | Methanosarcina mazei | Mutation(s): 0 Gene Names: MM_0920 EC: 3.6.1 |  | |
UniProt | |||||
Find proteins for Q8PYE2 (Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)) Explore Q8PYE2 Go to UniProtKB: Q8PYE2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8PYE2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | C [auth A], D [auth B], E [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.253
- R-Value Work: 0.207
- R-Value Observed: 0.208
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 39.397 | α = 99.98 |
| b = 42.437 | β = 100.43 |
| c = 55.599 | γ = 117.57 |
| Software Name | Purpose |
|---|---|
| SHELXCD | phasing |
| SHELXE | model building |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2009-04-07 Deposition Author(s): Patskovsky, Y., Romero, R., Gilmore, M., Do, J., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2009-04-07
Type: Initial release - Version 1.1: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.2: 2017-11-01
Changes: Refinement description - Version 1.3: 2018-11-21
Changes: Data collection, Structure summary - Version 1.4: 2021-02-10
Changes: Database references, Derived calculations, Structure summary - Version 1.5: 2024-02-21
Changes: Data collection, Database references
