Download MendeleyThe crystal structure of the GAF domain/HD domain protein from Geobacter sulfurreducens
Zhang, R., Hatzos, C., Clancy, S., Joachimiak, A.To be published.
3EEA
The crystal structure of the GAF domain/HD domain protein from Geobacter sulfurreducens
- PDB DOI: https://doi.org/10.2210/pdb3EEA/pdb
- Classification: structural genomics, unknown function
- Organism(s): Geobacter sulfurreducens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-09-04 Released: 2008-11-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.241
- R-Value Work: 0.200
- R-Value Observed: 0.202
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GAF domain/HD domain protein | 162 | Geobacter sulfurreducens | Mutation(s): 0 Gene Names: GSU1007 |  | |
UniProt | |||||
Find proteins for Q74EF5 (Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)) Explore Q74EF5 Go to UniProtKB: Q74EF5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q74EF5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PG6 Query on PG6 | C [auth A], D [auth B] | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE C12 H26 O6 DMDPGPKXQDIQQG-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.241
- R-Value Work: 0.200
- R-Value Observed: 0.202
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 35.453 | α = 90 |
| b = 79.471 | β = 90 |
| c = 112.632 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2008-11-04 Deposition Author(s): Zhang, R., Hatzos, C., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2008-11-04
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2024-02-21
Changes: Data collection, Database references, Derived calculations
