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Insights into the Replisome from the Crystral Structure of the Ternary Complex of the Eubacterial DNA Polymerase III alpha-subunit
 
 
DOI:10.2210/pdb3e0d/pdb   NDB ID: PD1166
3E0D
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Transferase/dna
    Structure Weight: 305689.69
     
    Molecule:DNA substrate template strand
    Polymer:1Type:polydeoxyribonucleotideLength:27
    Chains:C, E
    Molecule:DNA substrate primer strand
    Polymer:2Type:polydeoxyribonucleotideLength:21
    Chains:D, F
    Molecule:DNA polymerase III subunit alpha
    Polymer:3Type:polypeptide(L)Length:1220
    Chains:A, B
    EC#:2.7.7.7 Go to IUBMB EC entry  
    Mutation:D20N, D212N, I539F, Q540E, V541A, V542E
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Thermus aquaticus Go to NCBI Taxonomy entry Expression System: Escherichia coli  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    CA     CALCIUM ION Ca 3DLigand Explorer Link out to Ligand Expos:CA Link out to SuperLigands:CA Link out to SuperHapten:CA
    DTP     2'-DEOXYADENOSINE 5'-TRIPHOSPHATE C10 H16 N5 O12 P3 3DLigand Explorer Link out to Ligand Expos:DTP Link out to SuperLigands:DTP Link out to SuperHapten:DTP
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE (parent: DC)(type: dnaLinking) C9 H14 N3 O6 P 3D Ligand Explorer Link out to Ligand Expos:DOC Link out to SuperLigands:DOC Link out to SuperHapten:DOC 2D
     
     
  •  
    Move Section Derived Data Hide
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Wing, R.A.,   Bailey, S.,   Steitz, T.A.

    Deposition:   2008-07-31
    Release:   2008-09-23
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 4.60
    R-Value: 0.287 (work)
    R-Free: 0.271
    Space Group: P 41
    Unit Cell:
      Length [Å] Angles [°]
    a = 149.55 α = 90.00 
    b = 149.55 β = 90.00 
    c = 163.34 γ = 90.00