2ZJ3
Isomerase domain of human glucose:fructose-6-phosphate amidotransferase
- PDB DOI: https://doi.org/10.2210/pdb2ZJ3/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-02-29 Released: 2009-01-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.217
- R-Value Work: 0.185
- R-Value Observed: 0.187
This is version 1.3 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1 | 375 | Homo sapiens | Mutation(s): 0 EC: 2.6.1.16 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q06210 (Homo sapiens) Explore Q06210 Go to UniProtKB: Q06210 | |||||
PHAROS: Q06210 GTEx: ENSG00000198380 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q06210 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| G6P Query on G6P | B [auth A] | 6-O-phosphono-alpha-D-glucopyranose C6 H13 O9 P NBSCHQHZLSJFNQ-DVKNGEFBSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.217
- R-Value Work: 0.185
- R-Value Observed: 0.187
- Space Group: I 41 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 78.652 | α = 90 |
| b = 78.652 | β = 90 |
| c = 274.477 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2009-01-13 Deposition Author(s): Nakaishi, Y., Bando, M., Kondo, K., Tsuge, H.
Revision History (Full details and data files)
- Version 1.0: 2009-01-13
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Database references, Derived calculations, Structure summary - Version 1.3: 2023-11-01
Changes: Data collection, Database references, Refinement description, Structure summary
