Download MendeleyCrystal structure of RRM-domain derived from human putative RNA-binding protein 11
Kawazoe, M., Takemoto, C., Kaminishi, T., Uchikubo-Kamo, T., Nishino, A., Morita, S., Terada, T., Shirouzu, M., Yokoyama, S.To be published.
2YWK
Crystal structure of RRM-domain derived from human putative RNA-binding protein 11
- PDB DOI: https://doi.org/10.2210/pdb2YWK/pdb
- Classification: RNA BINDING PROTEIN
- Organism(s): Homo sapiens
- Mutation(s): No
- Deposited: 2007-04-20 Released: 2008-04-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.54 Å
- R-Value Free: 0.214
- R-Value Work: 0.190
- R-Value Observed: 0.190
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative RNA-binding protein 11 | 95 | Homo sapiens | Mutation(s): 0 Gene Names: RBM11 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P57052 (Homo sapiens) Explore P57052 Go to UniProtKB: P57052 | |||||
PHAROS: P57052 GTEx: ENSG00000185272 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P57052 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.54 Å
- R-Value Free: 0.214
- R-Value Work: 0.190
- R-Value Observed: 0.190
- Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 46.366 | α = 90 |
| b = 46.366 | β = 90 |
| c = 59.596 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data collection |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2008-04-22 Deposition Author(s): Kawazoe, M., Takemoto, C., Kaminishi, T., Uchikubo-Kamo, T., Nishino, A., Morita, S., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2008-04-22
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-11
Changes: Refinement description - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Refinement description - Version 1.4: 2023-11-15
Changes: Data collection
