2VZS
Chitosan Product complex of Amycolatopsis orientalis exo-chitosanase CsxA
- PDB DOI: https://doi.org/10.2210/pdb2VZS/pdb
- Classification: HYDROLASE
- Organism(s): Amycolatopsis orientalis
- Expression System: Streptomyces lividans TK24
- Mutation(s): No
- Deposited: 2008-08-05 Released: 2008-10-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.220
- R-Value Work: 0.173
- R-Value Observed: 0.175
This is version 1.4 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| EXO-BETA-D-GLUCOSAMINIDASE | 1,032 | Amycolatopsis orientalis | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q56F26 (Amycolatopsis orientalis) Explore Q56F26 Go to UniProtKB: Q56F26 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q56F26 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GCS Query on GCS | F [auth A], L [auth B] | 2-amino-2-deoxy-beta-D-glucopyranose C6 H13 N O5 MSWZFWKMSRAUBD-QZABAPFNSA-N |  | ||
| CD Query on CD | C [auth A] D [auth A] E [auth A] H [auth B] I [auth B] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | G [auth A], K [auth B], M [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.220
- R-Value Work: 0.173
- R-Value Observed: 0.175
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 86.544 | α = 90 |
| b = 121.81 | β = 90.42 |
| c = 91.843 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
Entry History
Deposition Data
- Released Date: 2008-10-14 Deposition Author(s): Lammerts van Bueren, A., Ghinet, M.G., Gregg, K., Fleury, A., Brzezinski, R., Boraston, A.B.
Revision History (Full details and data files)
- Version 1.0: 2008-10-14
Type: Initial release - Version 1.1: 2011-05-07
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2017-07-05
Changes: Data collection - Version 1.4: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Other, Structure summary
