Download MendeleyCrystal structure of aminohydrolase from Caulobacter crescentus.
Fedorov, A.A., Fedorov, E.V., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
2RAG
Crystal structure of aminohydrolase from Caulobacter crescentus
- PDB DOI: https://doi.org/10.2210/pdb2RAG/pdb
- Classification: HYDROLASE
- Organism(s): Caulobacter vibrioides CB15
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-09-14 Released: 2007-10-02
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.250
- R-Value Work: 0.238
- R-Value Observed: 0.238
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Dipeptidase | 417 | Caulobacter vibrioides CB15 | Mutation(s): 0 Gene Names: CC_2746 |  | |
UniProt | |||||
Find proteins for Q9A4T4 (Caulobacter vibrioides (strain ATCC 19089 / CB15)) Explore Q9A4T4 Go to UniProtKB: Q9A4T4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9A4T4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | E [auth A] F [auth A] H [auth B] I [auth B] K [auth C] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| CL Query on CL | G [auth A], J [auth B], M [auth C], P [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.250
- R-Value Work: 0.238
- R-Value Observed: 0.238
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 79.672 | α = 90 |
| b = 129.238 | β = 104.76 |
| c = 99.226 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| ADSC | data collection |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SHELX | phasing |
Entry History
Deposition Data
- Released Date: 2007-10-02 Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2007-10-02
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2018-11-14
Changes: Data collection, Structure summary - Version 1.3: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
