Download MendeleyCrystal structure of a putative deoxyguanosinetriphosphate triphosphohydrolase from Pseudomonas syringae pv. phaseolicola 1448A at 2.35 A resolution
Rao, K.N., Burley, S.K., Swaminathan, S.To be published.
2PGS
Crystal structure of a putative deoxyguanosinetriphosphate triphosphohydrolase from Pseudomonas syringae pv. phaseolicola 1448A
- PDB DOI: https://doi.org/10.2210/pdb2PGS/pdb
- Classification: HYDROLASE
- Organism(s): Pseudomonas savastanoi pv. phaseolicola 1448A
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2007-04-10 Released: 2007-04-24
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.273
- R-Value Work: 0.251
- R-Value Observed: 0.251
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative deoxyguanosinetriphosphate triphosphohydrolase | 451 | Pseudomonas savastanoi pv. phaseolicola 1448A | Mutation(s): 11 Gene Names: PSPPH_2088 |  | |
UniProt | |||||
Find proteins for Q48JX0 (Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)) Explore Q48JX0 Go to UniProtKB: Q48JX0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q48JX0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.273
- R-Value Work: 0.251
- R-Value Observed: 0.251
- Space Group: P 63 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 103.73 | α = 90 |
| b = 103.73 | β = 90 |
| c = 159.12 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| CBASS | data collection |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| SHELXD | phasing |
| SHARP | phasing |
| ARP/wARP | model building |
Entry History
Deposition Data
- Released Date: 2007-04-24 Deposition Author(s): Rao, K.N., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2007-04-24
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
