Download MendeleyCrystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5
Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Nakagawa, N., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S.To be published.
2PCJ
Crystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5
- PDB DOI: https://doi.org/10.2210/pdb2PCJ/pdb
- Classification: HYDROLASE
- Organism(s): Aquifex aeolicus VF5
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-03-30 Released: 2007-10-02
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.208
- R-Value Work: 0.180
- R-Value Observed: 0.180
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Lipoprotein-releasing system ATP-binding protein lolD | 224 | Aquifex aeolicus VF5 | Mutation(s): 0 EC: 3.6.3 |  | |
UniProt | |||||
Find proteins for O66646 (Aquifex aeolicus (strain VF5)) Explore O66646 Go to UniProtKB: O66646 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O66646 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO3 Query on SO3 | C [auth B] | SULFITE ION O3 S LSNNMFCWUKXFEE-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.208
- R-Value Work: 0.180
- R-Value Observed: 0.180
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 48.49 | α = 90 |
| b = 70.81 | β = 90 |
| c = 120.824 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data collection |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2007-10-02 Deposition Author(s): Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Nakagawa, N., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-10-02
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2023-10-25
Changes: Data collection, Database references, Refinement description
