Download MendeleyCrystal structure of trans-aconitate methyltransferase from Agrobacterium tumefaciens
Chang, C., Xu, X., Zheng, H., Savchenko, A., Joachimiak, A.To be published.
2P35
Crystal structure of trans-aconitate methyltransferase from Agrobacterium tumefaciens
- PDB DOI: https://doi.org/10.2210/pdb2P35/pdb
- Classification: TRANSFERASE
- Organism(s): Agrobacterium fabrum str. C58
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2007-03-08 Released: 2007-04-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.214
- R-Value Work: 0.186
- R-Value Observed: 0.187
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Trans-aconitate 2-methyltransferase | 259 | Agrobacterium fabrum str. C58 | Mutation(s): 7 Gene Names: tam, Atu0870, AGR_C_1589 EC: 2.1.1.144 |  | |
UniProt | |||||
Find proteins for Q8UH15 (Agrobacterium fabrum (strain C58 / ATCC 33970)) Explore Q8UH15 Go to UniProtKB: Q8UH15 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8UH15 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SAH Query on SAH | C [auth A], D [auth B] | S-ADENOSYL-L-HOMOCYSTEINE C14 H20 N6 O5 S ZJUKTBDSGOFHSH-WFMPWKQPSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.214
- R-Value Work: 0.186
- R-Value Observed: 0.187
- Space Group: P 65
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 103.097 | α = 90 |
| b = 103.097 | β = 90 |
| c = 107.457 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| HKL-3000 | phasing |
Entry History
Deposition Data
- Released Date: 2007-04-10 Deposition Author(s): Chang, C., Xu, X., Zheng, H., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2007-04-10
Type: Initial release - Version 1.1: 2007-11-14
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance
