Download MendeleyCrystal structure of a putative Fe-S biosynthesis protein from Lactobacillus salivarius with novel protein fold
Agarwal, R., Burley, S.K., Swaminathan, S.To be published.
2P2E
Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus salivarius with novel protein fold
- PDB DOI: https://doi.org/10.2210/pdb2P2E/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Ligilactobacillus salivarius UCC118
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2007-03-07 Released: 2007-03-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.48 Å
- R-Value Free: 0.273
- R-Value Work: 0.229
- R-Value Observed: 0.229
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative Fe-S biosynthesis protein | 128 | Ligilactobacillus salivarius UCC118 | Mutation(s): 5 Gene Names: LSL_1730 |  | |
UniProt | |||||
Find proteins for Q1WRG6 (Ligilactobacillus salivarius (strain UCC118)) Explore Q1WRG6 Go to UniProtKB: Q1WRG6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q1WRG6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.48 Å
- R-Value Free: 0.273
- R-Value Work: 0.229
- R-Value Observed: 0.229
- Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 94.577 | α = 90 |
| b = 94.577 | β = 90 |
| c = 36.854 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| CBASS | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELXD | phasing |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2007-03-20 Deposition Author(s): Agarwal, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2007-03-20
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.3: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
