Download Mendeleycrystal structure of Marchantia polymorpha stilbenecarboxylate synthase 2 (STCS2)
Borel, F., Schroeder, G., Schroeder, J., Ferrer, J.-L.To be published.
2P0U
crystal structure of Marchantia polymorpha stilbenecarboxylate synthase 2 (STCS2)
- PDB DOI: https://doi.org/10.2210/pdb2P0U/pdb
- Classification: TRANSFERASE
- Organism(s): Marchantia polymorpha
- Expression System: Escherichia coli BL21
- Mutation(s): Yes
- Deposited: 2007-03-01 Released: 2007-03-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.217
- R-Value Work: 0.188
- R-Value Observed: 0.188
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Stilbenecarboxylate synthase 2 | 413 | Marchantia polymorpha | Mutation(s): 1 Gene Names: STCS2 EC: 2.3.1.74 |  | |
UniProt | |||||
Find proteins for Q5I6Y1 (Marchantia polymorpha) Explore Q5I6Y1 Go to UniProtKB: Q5I6Y1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5I6Y1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | C [auth A], D [auth A], G [auth B], H [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | E [auth A], I [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| NI Query on NI | F [auth B] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| CSD Query on CSD | A, B | L-PEPTIDE LINKING | C3 H7 N O4 S |  | CYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.217
- R-Value Work: 0.188
- R-Value Observed: 0.188
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 129.27 | α = 90 |
| b = 133.2 | β = 90 |
| c = 53.49 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| ProDC | data collection |
| XDS | data reduction |
| XDS | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2007-03-13 Deposition Author(s): Borel, F., Schroeder, G., Schroeder, J., Ferrer, J.-L.
Revision History (Full details and data files)
- Version 1.0: 2007-03-13
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.3: 2017-10-18
Changes: Refinement description - Version 1.4: 2023-08-30
Changes: Data collection, Database references, Derived calculations, Refinement description
