Download MendeleyyheA from Bacillus subtilis
Binkowski, T.A., Borovilos, M., Abdullah, J., Joachimiak, A.To be published.
2OEE
yheA from Bacillus subtilis
- PDB DOI: https://doi.org/10.2210/pdb2OEE/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Bacillus subtilis
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2006-12-29 Released: 2007-01-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.249
- R-Value Work: 0.217
- R-Value Observed: 0.218
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| UPF0342 protein yheA | 117 | Bacillus subtilis | Mutation(s): 7 Gene Names: yheA |  | |
UniProt | |||||
Find proteins for O07542 (Bacillus subtilis (strain 168)) Explore O07542 Go to UniProtKB: O07542 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O07542 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CA Query on CA | C [auth A], D [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.249
- R-Value Work: 0.217
- R-Value Observed: 0.218
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.246 | α = 90 |
| b = 53.246 | β = 90 |
| c = 166.348 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| MLPHARE | phasing |
Entry History
Deposition Data
- Released Date: 2007-01-30 Deposition Author(s): Binkowski, T.A., Borovilos, M., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2007-01-30
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2023-12-27
Changes: Data collection, Database references, Derived calculations
