Download MendeleyThe crystal structure of a hypothetical protein (Y1212_ARCFU) from Archeoglobus fulgidus
Tyagi, R., Burley, S.K., Swaminathan, S.To be published.
2IOJ
Crystal structure of protein AF1212 from Archaeoglobus fulgidus, Pfam DRTGG
- PDB DOI: https://doi.org/10.2210/pdb2IOJ/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Archaeoglobus fulgidus
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2006-10-10 Released: 2006-10-31
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.268
- R-Value Work: 0.230
- R-Value Observed: 0.236
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein AF_1212 | 139 | Archaeoglobus fulgidus | Mutation(s): 4 Gene Names: AF_1212 |  | |
UniProt | |||||
Find proteins for O29056 (Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)) Explore O29056 Go to UniProtKB: O29056 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O29056 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.268
- R-Value Work: 0.230
- R-Value Observed: 0.236
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 62.409 | α = 90 |
| b = 66.016 | β = 90 |
| c = 122.392 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| CBASS | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SHELX | phasing |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2006-10-31 Deposition Author(s): Tyagi, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2006-10-31
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
