2FT3
Crystal structure of the biglycan dimer core protein
- PDB DOI: https://doi.org/10.2210/pdb2FT3/pdb
- Classification: STRUCTURAL PROTEIN, SIGNALING PROTEIN
- Organism(s): Bos taurus
- Mutation(s): No
- Deposited: 2006-01-23 Released: 2006-03-28
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.40 Å
- R-Value Free: 0.291
- R-Value Work: 0.258
- R-Value Observed: 0.259
This is version 1.4 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Biglycan | 332 | Bos taurus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P21809 (Bos taurus) Explore P21809 Go to UniProtKB: P21809 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P21809 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | G [auth A] I [auth B] K [auth C] M [auth D] O [auth E] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
| FLC Query on FLC | H [auth A] J [auth B] L [auth C] N [auth D] P [auth E] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.40 Å
- R-Value Free: 0.291
- R-Value Work: 0.258
- R-Value Observed: 0.259
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 206.511 | α = 90 |
| b = 119.222 | β = 116.61 |
| c = 140.625 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALA | data scaling |
| MOLREP | phasing |
| RESOLVE | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| MOSFLM | data reduction |
| CCP4 | data scaling |
Entry History
Deposition Data
- Released Date: 2006-03-28 Deposition Author(s): Scott, P.G., Dodd, C.M., Bergmann, E.M.
Revision History (Full details and data files)
- Version 1.0: 2006-03-28
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.4: 2023-08-30
Changes: Data collection, Database references, Refinement description, Structure summary
