Download MendeleyStage V Sporolation Protein S (SPOVS) from Thermus thermophilus Zinc form
Rehse, P.H., Yokoyama, S.To be published.
2EK0
Stage V Sporolation Protein S (SPOVS) from Thermus thermophilus Zinc form
- PDB DOI: https://doi.org/10.2210/pdb2EK0/pdb
- Classification: METAL BINDING PROTEIN
- Organism(s): Thermus thermophilus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2007-03-22 Released: 2007-09-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.255
- R-Value Work: 0.229
- R-Value Observed: 0.229
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Stage V sporulation protein S (SpoVS) related protein | 90 | Thermus thermophilus | Mutation(s): 1 Gene Names: HB8 |  | |
UniProt | |||||
Find proteins for Q5SK02 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SK02 Go to UniProtKB: Q5SK02 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SK02 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | C [auth A], D [auth B], E [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.255
- R-Value Work: 0.229
- R-Value Observed: 0.229
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 69.237 | α = 90 |
| b = 72.772 | β = 90 |
| c = 68.438 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| MOLREP | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| ADSC | data collection |
| HKL-2000 | data reduction |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2007-09-25 Deposition Author(s): Rehse, P.H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-09-25
Type: Initial release - Version 1.1: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.2: 2017-10-11
Changes: Refinement description - Version 1.3: 2021-11-10
Changes: Database references, Derived calculations - Version 1.4: 2023-10-25
Changes: Data collection, Refinement description
