Download MendeleyCrystal structure of aq_1058, a transcriptional regulator (TerR/AcrR family) from Aquifex aeolicus VF5
Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S.To be published.
2EH3
Crystal structure of aq_1058, a transcriptional regulator (TerR/AcrR family) from Aquifex aeolicus VF5
- PDB DOI: https://doi.org/10.2210/pdb2EH3/pdb
- Classification: TRANSCRIPTION
- Organism(s): Aquifex aeolicus VF5
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2007-03-03 Released: 2007-09-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.221
- R-Value Work: 0.206
- R-Value Observed: 0.206
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Transcriptional regulator | 179 | Aquifex aeolicus VF5 | Mutation(s): 2 Gene Names: acrR1 |  | |
UniProt | |||||
Find proteins for O67157 (Aquifex aeolicus (strain VF5)) Explore O67157 Go to UniProtKB: O67157 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O67157 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A], C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.221
- R-Value Work: 0.206
- R-Value Observed: 0.206
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 49.857 | α = 90 |
| b = 54.919 | β = 90 |
| c = 73.144 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| BSS | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2007-09-04 Deposition Author(s): Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-09-04
Type: Initial release - Version 1.1: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance
