Download MendeleyCrystal structure of histone chaperone Asf1 in complex with a C-terminus of histone H3
Padmanabhan, B., Yokoyama, S.To be published.
2DZE
Crystal structure of histone chaperone Asf1 in complex with a C-terminus of histone H3
- PDB DOI: https://doi.org/10.2210/pdb2DZE/pdb
- Classification: CHAPERONE
- Organism(s): Schizosaccharomyces pombe, Schizosaccharomyces pombe (strain 972 / ATCC 24843)
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2006-09-28 Released: 2007-10-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.244
- R-Value Work: 0.214
- R-Value Observed: 0.215
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Histone chaperone cia1 | 161 | Schizosaccharomyces pombe | Mutation(s): 0 Gene Names: cia1 |  | |
UniProt | |||||
Find proteins for O74515 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore O74515 Go to UniProtKB: O74515 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O74515 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 10-mer peptide from Histone H3.1/H3.2 | C [auth X] | 10 | N/A | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for P09988 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore P09988 Go to UniProtKB: P09988 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P09988 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PGE Query on PGE | D [auth A], E [auth B] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.244
- R-Value Work: 0.214
- R-Value Observed: 0.215
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 40.155 | α = 107.35 |
| b = 52.13 | β = 105.94 |
| c = 60.654 | γ = 93.95 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| BL26B1 | data collection |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2007-10-16 Deposition Author(s): Padmanabhan, B., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-10-16
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
