Download MendeleyCrystal structure of Bromodomain-containing protein 4
Padmanabhan, B., Yokoyama, S.To be published.
2DWW
Crystal structure of Bromodomain-containing protein 4
- PDB DOI: https://doi.org/10.2210/pdb2DWW/pdb
- Classification: TRANSCRIPTION
- Organism(s): Mus musculus
- Mutation(s): Yes
- Deposited: 2006-08-21 Released: 2007-08-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.245
- R-Value Work: 0.186
- R-Value Observed: 0.189
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Bromodomain-containing protein 4 | 114 | Mus musculus | Mutation(s): 7 Gene Names: Brd4, Mcap |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9ESU6 (Mus musculus) Explore Q9ESU6 Go to UniProtKB: Q9ESU6 | |||||
IMPC: MGI:1888520 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9ESU6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CL Query on CL | B [auth A], C [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.245
- R-Value Work: 0.186
- R-Value Observed: 0.189
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 73.891 | α = 90 |
| b = 57.779 | β = 90 |
| c = 33.588 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MOLREP | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2007-08-21 Deposition Author(s): Padmanabhan, B., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-08-21
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2024-04-03
Changes: Data collection, Database references, Derived calculations, Refinement description
