Download MendeleyHypothetical Transferase from Thermus thermophilus
Rehse, P.H., Yokoyama, S.To be published.
2DPW
Hpothetical Transferase Structure from Thermus thermophilus
- PDB DOI: https://doi.org/10.2210/pdb2DPW/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2006-05-17 Released: 2007-05-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.281
- R-Value Work: 0.226
- R-Value Observed: 0.226
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein TTHA0179 | 232 | Thermus thermophilus HB8 | Mutation(s): 2 |  | |
UniProt | |||||
Find proteins for Q5SLW4 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SLW4 Go to UniProtKB: Q5SLW4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SLW4 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NA Query on NA | B [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.281
- R-Value Work: 0.226
- R-Value Observed: 0.226
- Space Group: P 61 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 76.19 | α = 90 |
| b = 76.19 | β = 90 |
| c = 196.98 | γ = 120 |
| Software Name | Purpose |
|---|---|
| d*TREK | data scaling |
| SOLVE | phasing |
| RESOLVE | phasing |
| CNS | refinement |
| PDB_EXTRACT | data extraction |
| CrystalClear | data reduction |
Entry History
Deposition Data
- Released Date: 2007-05-22 Deposition Author(s): Rehse, P.H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-05-22
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance
