Download MendeleyHypothetical protein VCA0330 from Vibrio cholerae O1 biovar eltor str. N16961
Binkowski, T.A., Hatzos, C., Moy, S., Collart, F., Joachimiak, A.To be published.
2D7V
Structure of OsmC-like Protein of Unknown Function VCA0330 from Vibrio cholerae O1 biovar eltor str. N16961
- PDB DOI: https://doi.org/10.2210/pdb2D7V/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Vibrio cholerae O1 biovar El Tor str. N16961
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2005-11-30 Released: 2006-01-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.97 Å
- R-Value Free: 0.258
- R-Value Work: 0.199
- R-Value Observed: 0.202
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein VCA0330 | 162 | Vibrio cholerae O1 biovar El Tor str. N16961 | Mutation(s): 4 Gene Names: VCA0330 |  | |
UniProt | |||||
Find proteins for Q9KMK9 (Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)) Explore Q9KMK9 Go to UniProtKB: Q9KMK9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9KMK9 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.97 Å
- R-Value Free: 0.258
- R-Value Work: 0.199
- R-Value Observed: 0.202
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 148.507 | α = 90 |
| b = 40.023 | β = 108.89 |
| c = 56.231 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-2000 | data scaling |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2006-01-10 Deposition Author(s): Binkowski, T.A., Hatzos, C., Moy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2006-01-10
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance
