Download MendeleyCrystal structure of hypothetical adenylosuccinate synthetase, PH0438 from Pyrococcus horikoshii OT3
Xie, Y., Kishishita, S., Murayama, K., Shirouzu, M., Yokoyama, S.To be published.
2D7U
Crystal structure of hypothetical adenylosuccinate synthetase, PH0438 from Pyrococcus horikoshii OT3
- PDB DOI: https://doi.org/10.2210/pdb2D7U/pdb
- Classification: LIGASE
- Organism(s): Pyrococcus horikoshii OT3
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2005-11-29 Released: 2006-05-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.285
- R-Value Work: 0.236
- R-Value Observed: 0.236
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Adenylosuccinate synthetase | 339 | Pyrococcus horikoshii OT3 | Mutation(s): 0 EC: 6.3.4.4 |  | |
UniProt | |||||
Find proteins for O58187 (Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)) Explore O58187 Go to UniProtKB: O58187 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O58187 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.285
- R-Value Work: 0.236
- R-Value Observed: 0.236
- Space Group: P 32 1 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 57.2 | α = 90 |
| b = 57.2 | β = 90 |
| c = 170.9 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2006-05-29 Deposition Author(s): Xie, Y., Kishisita, S., Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2006-05-29
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Refinement description
