Download MendeleyCrystal structure of mannose-1-phosphate geranyltransferase from Thermus thermophilus HB8
Sugahara, M., Kunishima, N.To be published.
2CU2
Crystal structure of mannose-1-phosphate geranyltransferase from Thermus thermophilus HB8
- PDB DOI: https://doi.org/10.2210/pdb2CU2/pdb
- Classification: TRANSFERASE
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2005-05-25 Released: 2006-08-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.253
- R-Value Work: 0.219
- R-Value Observed: 0.219
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| putative mannose-1-phosphate guanylyl transferase | 337 | Thermus thermophilus HB8 | Mutation(s): 0 EC: 2.7.7.13 |  | |
UniProt | |||||
Find proteins for Q5SHI0 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SHI0 Go to UniProtKB: Q5SHI0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SHI0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | B [auth A], C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.253
- R-Value Work: 0.219
- R-Value Observed: 0.219
- Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 84.128 | α = 90 |
| b = 91.185 | β = 90 |
| c = 118.633 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| SCALEPACK | data scaling |
| SOLVE | phasing |
| CNS | refinement |
| HKL-2000 | data reduction |
Entry History
Deposition Data
- Released Date: 2006-08-08 Deposition Author(s): Sugahara, M., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2006-08-08
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.3: 2024-03-13
Changes: Data collection, Database references, Derived calculations
