Download MendeleyCrystal structure of Lmo0035 protein (46906266) from Listeria Monocytogenes 4b F2365 at 1.50 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
2AML
Crystal structure of Lmo0035 protein (46906266) from LISTERIA MONOCYTOGENES 4b F2365 at 1.50 A resolution
- PDB DOI: https://doi.org/10.2210/pdb2AML/pdb
- Classification: TRANSFERASE
- Organism(s): Listeria monocytogenes serotype 4b str. F2365
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2005-08-09 Released: 2005-10-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.168
- R-Value Work: 0.140
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| SIS domain protein | 373 | Listeria monocytogenes serotype 4b str. F2365 | Mutation(s): 8 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | C [auth A], F [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
| GOL Query on GOL | D [auth A], G [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| ACT Query on ACT | E [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.168
- R-Value Work: 0.140
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/M32AML
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 56.315 | α = 90 |
| b = 101.397 | β = 90 |
| c = 120.151 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SCALA | data scaling |
| PDB_EXTRACT | data extraction |
| MOSFLM | data reduction |
| CCP4 | data scaling |
| SHELX | phasing |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2005-10-18 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History (Full details and data files)
- Version 1.0: 2005-10-18
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2023-01-25
Changes: Database references, Derived calculations
