Download MendeleyCrystal Structure of Uridylate kinase
Gorman, J., Shapiro, L.To be published.
2A1F
Crystal Structure of Uridylate kinase
- PDB DOI: https://doi.org/10.2210/pdb2A1F/pdb
- Classification: TRANSFERASE
- Organism(s): Haemophilus influenzae
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2005-06-20 Released: 2005-06-28
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.263
- R-Value Work: 0.210
- R-Value Observed: 0.213
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uridylate kinase | 247 | Haemophilus influenzae | Mutation(s): 0 Gene Names: pyrH, smbA EC: 2.7.4 |  | |
UniProt | |||||
Find proteins for P43890 (Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)) Explore P43890 Go to UniProtKB: P43890 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P43890 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.263
- R-Value Work: 0.210
- R-Value Observed: 0.213
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 77.369 | α = 94.85 |
| b = 79.889 | β = 96.68 |
| c = 79.899 | γ = 96.88 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2005-06-28 Deposition Author(s): Gorman, J., Shapiro, L., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2005-06-28
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2021-02-03
Changes: Database references, Structure summary - Version 1.4: 2023-08-23
Changes: Data collection, Database references, Refinement description
