Download MendeleyHigh Resolution Structure of Domain III from Class II Fusion Protein of Semliki Forest Virus
Vaney, M.C., Vigouroux, A., Rey, F.A.To be published.
2V33
High resolution crystal structure of domain III of E1 fusion glycoprotein of Semliki Forest Virus
- PDB DOI: https://doi.org/10.2210/pdb2V33/pdb
- Classification: VIRAL PROTEIN
- Organism(s): Semliki Forest virus
- Mutation(s): No
- Deposited: 2007-06-11 Released: 2008-07-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.226
- R-Value Work: 0.198
- R-Value Observed: 0.199
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| E1 ENVELOPE GLYCOPROTEIN | 91 | Semliki Forest virus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P03315 (Semliki forest virus) Explore P03315 Go to UniProtKB: P03315 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P03315 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NO3 Query on NO3 | C [auth A], D [auth A] | NITRATE ION N O3 NHNBFGGVMKEFGY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.226
- R-Value Work: 0.198
- R-Value Observed: 0.199
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.343 | α = 90 |
| b = 62.659 | β = 90 |
| c = 113.735 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
Entry History
Deposition Data
- Released Date: 2008-07-22 Deposition Author(s): Vaney, M.C., Rey, F.A.
Revision History (Full details and data files)
- Version 1.0: 2008-07-22
Type: Initial release - Version 1.1: 2014-04-16
Changes: Database references, Derived calculations, Non-polymer description, Other, Version format compliance - Version 1.2: 2019-01-30
Changes: Data collection, Experimental preparation, Other - Version 1.3: 2023-12-13
Changes: Data collection, Database references, Derived calculations, Other, Refinement description
