2TBV

STRUCTURE OF TOMATO BUSHY STUNT VIRUS. V. COAT PROTEIN SEQUENCE DETERMINATION AND ITS STRUCTURAL IMPLICATIONS

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.90 Å

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This is version 1.3 of the entry. See complete history. 


Literature

Structure of tomato bushy stunt virus. V. Coat protein sequence determination and its structural implications

Hopper, P., Harrison, S.C., Sauer, R.T.

(1984) J Mol Biol 177: 701-713

  • DOI: https://doi.org/10.1016/0022-2836(84)90045-7
  • Primary Citation of Related Structures:  
    2TBV

  • PubMed Abstract: 

    We report the chemically determined sequence of most of the polypeptide chain of the coat protein of tomato bushy stunt virus. Peptide locations have been determined by comparison with the high-resolution electron density map from X-ray crystallographic analysis as well as by conventional chemical overlaps. Three small gaps remain in the 387-residue sequence. Positively charged side-chains are concentrated in the N-terminal part of the polypeptide (the R domain) as well as on inward-facing surfaces of the S domain. There is homology of S-domain sequences with structurally corresponding residues in southern bean mosaic virus.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
TOMATO BUSHY STUNT VIRUS
A, B, C
387Tomato bushy stunt virusMutation(s): 0 
UniProt
Find proteins for P11795 (Tomato bushy stunt virus (strain BS-3))
Explore P11795 
Go to UniProtKB:  P11795
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP11795
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.90 Å
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 383.2α = 90
b = 383.2β = 90
c = 383.2γ = 90

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1984-07-20
    Type: Initial release
  • Version 1.1: 2008-03-25
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2024-02-21
    Changes: Data collection, Database references, Derived calculations, Other