Download MendeleyCrystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae.
Fedorov, A.A., Toro, R., Fedorov, E.V., Sauder, J.M., Burley, S.K., Almo, S.C.To be published.
2PS2
Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae
- PDB DOI: https://doi.org/10.2210/pdb2PS2/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Aspergillus oryzae RIB40
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-05-04 Released: 2007-05-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.209
- R-Value Work: 0.194
- R-Value Observed: 0.194
wwPDB Validation 3D Report Full Report
This is version 1.6 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative mandelate racemase/muconate lactonizing enzyme | 371 | Aspergillus oryzae RIB40 | Mutation(s): 0 Gene Names: AO090011000058 |  | |
UniProt | |||||
Find proteins for Q2U1E8 (Aspergillus oryzae (strain ATCC 42149 / RIB 40)) Explore Q2U1E8 Go to UniProtKB: Q2U1E8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q2U1E8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | E [auth A], F [auth B], G [auth C], H [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.209
- R-Value Work: 0.194
- R-Value Observed: 0.194
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 94.865 | α = 90 |
| b = 94.865 | β = 90 |
| c = 330.673 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| ADSC | data collection |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SHELXS | phasing |
Entry History
Deposition Data
- Released Date: 2007-05-22 Deposition Author(s): Fedorov, A.A., Toro, R., Fedorov, E.V., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2007-05-22
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2012-10-24
Changes: Structure summary - Version 1.4: 2018-11-14
Changes: Data collection, Structure summary - Version 1.5: 2021-02-03
Changes: Database references, Derived calculations, Structure summary - Version 1.6: 2024-02-21
Changes: Data collection, Database references
