2L6X

Solution NMR Structure of Proteorhodopsin.

PDB DOI: https://doi.org/10.2210/pdb2L6X/pdb
BMRB: 17327

Classification: PROTON TRANSPORT
Organism(s): uncultured marine gamma proteobacterium EBAC31A08
Expression System: Escherichia coli
Mutation(s): No
Membrane Protein: Yes OPMPDBTMMemProtMD

Deposited: 2010-11-29 Released: 2011-11-09
Deposition Author(s): Reckel, S., Gottstein, D., Stehle, J., Loehr, F., Takeda, M., Silvers, R., Kainosho, M., Glaubitz, C., Bernhard, F., Schwalbe, H., Guntert, P., Doetsch, V., Membrane Protein Structures by Solution NMR (MPSbyNMR)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

This is version 1.4 of the entry. See complete history.

Literature

Solution NMR structure of proteorhodopsin.

Reckel, S., Gottstein, D., Stehle, J., Lohr, F., Verhoefen, M.K., Takeda, M., Silvers, R., Kainosho, M., Glaubitz, C., Wachtveitl, J., Bernhard, F., Schwalbe, H., Guntert, P., Dotsch, V.

(2011) Angew Chem Int Ed Engl 50: 11942-11946

PubMed: 22034093 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1002/anie.201105648
Primary Citation of Related Structures:
2L6X

Organizational Affiliation

Institute of Biophysical Chemistry and Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, Max-von-Laue Str. 9, 60438 Frankfurt, Germany.

Macromolecule Content

Total Structure Weight: 27.01 kDa
Atom Count: 1,837
Modelled Residue Count: 235
Deposited Residue Count: 243
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Green-light absorbing proteorhodopsin	A	243	uncultured marine gamma proteobacterium EBAC31A08	Mutation(s): 0 Membrane Entity: Yes
UniProt
Find proteins for Q9F7P4 (Gamma-proteobacterium EBAC31A08) Explore Q9F7P4 Go to UniProtKB: Q9F7P4
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9F7P4
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
RET Query on RET Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A]	B [auth A]	RETINAL C₂₀ H₂₈ O NCYCYZXNIZJOKI-OVSJKPMPSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: target function

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2011-11-09

Deposition Author(s):

Membrane Protein Structures by Solution NMR (MPSbyNMR)

Revision History (Full details and data files)

Version 1.0: 2011-11-09
Type: Initial release
Version 1.1: 2011-12-28
Changes: Database references
Version 1.2: 2012-04-11
Changes: Other
Version 1.3: 2015-06-17
Changes: Non-polymer description
Version 1.4: 2020-02-05
Changes: Data collection, Database references, Derived calculations, Other

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Deposit Data

Help and Resources

2L6X

Solution NMR Structure of Proteorhodopsin.

Solution NMR structure of proteorhodopsin.

Entity ID: 1

UniProt

Entity Groups

Sequence Annotations

Expand

Experimental Data

Structure Validation

Deposition Data

Revision History (Full details and data files)