2KUY
Structure of Glycocin F
- PDB DOI: https://doi.org/10.2210/pdb2KUY/pdb
- BMRB: 16747
- Classification: ANTIMICROBIAL PROTEIN
- Organism(s): Lactiplantibacillus plantarum
- Mutation(s): No
- Membrane Protein: Yes OPM
- Deposited: 2010-03-01 Released: 2011-05-04
Experimental Data Snapshot
- Method: SOLUTION NMR
- Conformers Calculated: 20
- Conformers Submitted: 12
- Selection Criteria: structures with the lowest energy
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Prebacteriocin glycocin F | 43 | Lactiplantibacillus plantarum | Mutation(s): 0 Membrane Entity: Yes |  | |
UniProt | |||||
Find proteins for E9K9Z1 (Lactiplantibacillus plantarum) Explore E9K9Z1 Go to UniProtKB: E9K9Z1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | E9K9Z1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | B [auth A], C [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: SOLUTION NMR
- Conformers Calculated: 20
- Conformers Submitted: 12
- Selection Criteria: structures with the lowest energy
Entry History
Deposition Data
- Released Date: 2011-05-04 Deposition Author(s): Venugopal, H., Edwards, P., Schwalbe, M., Claridge, J., Stepper, J., Patchett, M., Loo, T., Libich, D., Norris, G., Pascal, S.
Revision History (Full details and data files)
- Version 1.0: 2011-05-04
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2020-02-05
Changes: Data collection, Derived calculations, Other - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Data collection, Derived calculations, Structure summary - Version 1.4: 2023-06-14
Changes: Database references, Other, Structure summary
