Structure of ribosomal protein L1-mRNA complex at 2.1 resolution.     DOI:10.2210/pdb2hw8/pdb   NDB ID: PR0225

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Primary Citation       Molecular Description Hide Classification: Structural Protein/rna Structure Weight: 36684.03   Molecule: 36-MER Polymer: 1 Type: polyribonucleotide Length: 36 Chains: B Molecule: 50S ribosomal protein L1 Polymer: 2 Type: polypeptide(L) Length: 228 Chains: A       Source Hide Polymer: 1 Scientific Name: Synthetic construct   Polymer: 2 Scientific Name: Thermus thermophilus Expression System: Escherichia coli bl21(de3)         Related PDB Entries Hide Id Details 1U63  The crystal structure of ribosomal protein L1 from Methanococcus jannaschii in complex with a specific fragment of its mRNA.  1ZHO  The crystal structure at 2.6 A of ribosomal protein L1 from Thermus thermophilus in complex with a 38 nt fragment of L1 mRNA from Methanoccocus vannielii. Space group is P21.        Ligand Chemical Component Hide Identifier Name Formula Interaction View Links BU1     1,4-BUTANEDIOL C4 H10 O2 Ligand Explorer K     POTASSIUM ION K Ligand Explorer MG     MAGNESIUM ION Mg Ligand Explorer       Modified Residues Hide Identifier Name Formula Interaction View Links MSE SELENOMETHIONINE (parent: MET)(type: lPeptideLinking) C5 H11 N O2 Se Ligand Explorer       Derived Data Hide SCOP Classification v1.75 - (1 Domains) PFAM Classification - (1 Domains) GO Terms - (11 Terms)     Reset Layout

Biological Assembly     More Images... View in Jmol Other Viewers close KiNG WebMol QuickPDB FirstGlance Kiosk SimpleViewer Protein Workshop Ligand Explorer Biological assembly assigned by authors         Deposition Summary Hide Authors:   Tishchenko, S.,   Nikonova, E.,   Nikulin, A.,   Nevskaya, N.,   Volchkov, S.,   Piendl, W.,   Garber, M.,   Nikonov, S. Deposition:   2006-08-01 Release:   2006-12-19 Last Modified (REVDAT):   2009-02-24       Experimental Details Hide Method:   X-RAY DIFFRACTION Experimental Data:    [ EDS ] Resolution[Å]: 2.10 R-Value: 0.212 (obs.) R-Free: 0.247 Space Group: P 65 2 2 Unit Cell:   Length [Å] Angles [°] a = 67.87 α = 90.00  b = 67.87 β = 90.00  c = 340.47 γ = 120.00        Structure Links Hide Molecule of the Month Features: 70S Ribosomes