Download MendeleyCrystal structure of NAD(P)H-flavin oxidoreductase from Helicobacter pylori
Chang, C., Xu, X., Zheng, H., Savchenko, A., Edwards, A., Joachimiak, A.To be published.
2H0U
Crystal structure of NAD(P)H-flavin oxidoreductase from Helicobacter pylori
- PDB DOI: https://doi.org/10.2210/pdb2H0U/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Helicobacter pylori
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2006-05-15 Released: 2006-06-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.221
- R-Value Work: 0.178
- R-Value Observed: 0.180
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| NADPH-flavin oxidoreductase | 217 | Helicobacter pylori | Mutation(s): 12 Gene Names: frxA |  | |
UniProt | |||||
Find proteins for Q7BGI8 (Helicobacter pylori) Explore Q7BGI8 Go to UniProtKB: Q7BGI8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7BGI8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FMN Query on FMN | B [auth A] | FLAVIN MONONUCLEOTIDE C17 H21 N4 O9 P FVTCRASFADXXNN-SCRDCRAPSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.221
- R-Value Work: 0.178
- R-Value Observed: 0.180
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 54.035 | α = 90 |
| b = 87.178 | β = 90 |
| c = 94.979 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SBC-Collect | data collection |
| HKL-2000 | data scaling |
| HKL-3000 | phasing |
| SHELXE | model building |
| SOLVE | phasing |
| RESOLVE | phasing |
| ARP/wARP | model building |
Entry History
Deposition Data
- Released Date: 2006-06-13 Deposition Author(s): Chang, C., Xu, X., Zheng, H., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2006-06-13
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Derived calculations, Version format compliance
