Download MendeleyCrystal structure of putative tagatose 6-phosphate kinase
Ramagopal, U.A., Fedorov, E., Almo, S.C.To be published.
2FIQ
Crystal structure of putative tagatose 6-phosphate kinase
- PDB DOI: https://doi.org/10.2210/pdb2FIQ/pdb
- Classification: TRANSFERASE
- Organism(s): Escherichia coli O157:H7
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2005-12-30 Released: 2006-04-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.25 Å
- R-Value Free: 0.233
- R-Value Work: 0.187
- R-Value Observed: 0.187
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| putative tagatose 6-phosphate kinase 1 | 420 | Escherichia coli O157:H7 | Mutation(s): 10 Gene Names: ECs2898 EC: 2.7.1.101 |  | |
UniProt | |||||
Find proteins for Q8X7H4 (Escherichia coli O157:H7) Explore Q8X7H4 Go to UniProtKB: Q8X7H4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8X7H4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.25 Å
- R-Value Free: 0.233
- R-Value Work: 0.187
- R-Value Observed: 0.187
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 92.352 | α = 90 |
| b = 100.001 | β = 90 |
| c = 206.549 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| CBASS | data collection |
| SHELXE | model building |
| RESOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2006-04-04 Deposition Author(s): Ramagopal, U.A., Fedorov, E., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2006-04-04
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2017-10-18
Changes: Advisory, Refinement description - Version 1.4: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
