Download MendeleyStructure of AQ2163 protein from Aquifex aeolicus
Lokanath, N.K., Kamiya, N., Pampa, K.J., Kunishima, N.To be published.
2E55
Structure of AQ2163 protein from Aquifex aeolicus
- PDB DOI: https://doi.org/10.2210/pdb2E55/pdb
- Classification: TRANSFERASE
- Organism(s): Aquifex aeolicus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2006-12-19 Released: 2008-01-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.230
- R-Value Work: 0.210
- R-Value Observed: 0.210
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uracil phosphoribosyltransferase | 208 | Aquifex aeolicus | Mutation(s): 0 EC: 2.4.2.9 |  | |
UniProt | |||||
Find proteins for O67914 (Aquifex aeolicus (strain VF5)) Explore O67914 Go to UniProtKB: O67914 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O67914 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | E [auth A], F [auth B], G [auth C], H [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.230
- R-Value Work: 0.210
- R-Value Observed: 0.210
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 63.39 | α = 90 |
| b = 70.67 | β = 97.96 |
| c = 90.166 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data collection |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2008-01-01 Deposition Author(s): Lokanath, N.K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2008-01-01
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Derived calculations, Version format compliance - Version 1.2: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
