Download MendeleyCrystal Structure of a Reduced Thioredoxin from Thermus thermophilus HB8
Yanai, H., Yokoyama, S., Kuramitsu, S.To be published.
2CVK
Crystal Structure of Thermus thermophilus Thioredoxin
- PDB DOI: https://doi.org/10.2210/pdb2CVK/pdb
- Classification: ELECTRON TRANSPORT
- Organism(s): Thermus thermophilus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2005-06-04 Released: 2005-12-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.263
- R-Value Work: 0.232
- R-Value Observed: 0.232
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Thioredoxin | 110 | Thermus thermophilus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q72HU9 (Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)) Explore Q72HU9 Go to UniProtKB: Q72HU9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q72HU9 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.263
- R-Value Work: 0.232
- R-Value Observed: 0.232
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 58.85 | α = 90 |
| b = 58.85 | β = 90 |
| c = 59.61 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2005-12-04 Deposition Author(s): Yanai, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2005-12-04
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.4: 2023-11-15
Changes: Data collection
