Download MendeleyCrystal structure of Putative lipase from the G-D-S-L family (17135349) from Nostoc sp. PCC 7120 at 2.02 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
1Z8H
CRYSTAL STRUCTURE OF a GDSL-like lipase (ALR1529) FROM NOSTOC SP. PCC 7120 AT 2.02 A RESOLUTION
- PDB DOI: https://doi.org/10.2210/pdb1Z8H/pdb
- Classification: HYDROLASE
- Organism(s): Nostoc sp. PCC 7120 = FACHB-418
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2005-04-11 Released: 2005-04-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.02 Å
- R-Value Free: 0.195
- R-Value Work: 0.155
- R-Value Observed: 0.157
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative lipase from the G-D-S-L family | 218 | Nostoc sp. PCC 7120 = FACHB-418 | Mutation(s): 2 Gene Names: alr1529 |  | |
UniProt | |||||
Find proteins for Q8YWS4 (Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)) Explore Q8YWS4 Go to UniProtKB: Q8YWS4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8YWS4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| IPA Query on IPA | F [auth A], G [auth A], J [auth C] | ISOPROPYL ALCOHOL C3 H8 O KFZMGEQAYNKOFK-UHFFFAOYSA-N |  | ||
| UNL Query on UNL | E [auth A], H [auth B], I [auth C], K [auth D] | Unknown ligand KFZMGEQAYNKOFK-UHFFFAOYSA-N | |||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.02 Å
- R-Value Free: 0.195
- R-Value Work: 0.155
- R-Value Observed: 0.157
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/M31Z8H
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 64.504 | α = 90 |
| b = 69.806 | β = 90 |
| c = 211.028 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SHELXD | phasing |
| autoSHARP | phasing |
| REFMAC | refinement |
Entry History
Deposition Data
- Released Date: 2005-04-19 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History (Full details and data files)
- Version 1.0: 2005-04-19
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2023-01-25
Changes: Database references, Derived calculations
