Download MendeleyStructure of gene product AF1437 from Archaeoglobus fulgidus
Cuff, M.E., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)To be published.
1Y8A
Structure of gene product AF1437 from Archaeoglobus fulgidus
- PDB DOI: https://doi.org/10.2210/pdb1Y8A/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Archaeoglobus fulgidus DSM 4304
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-12-10 Released: 2005-01-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.223
- R-Value Work: 0.183
- R-Value Observed: 0.185
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hypothetical protein AF1437 | 332 | Archaeoglobus fulgidus DSM 4304 | Mutation(s): 0 Gene Names: AF1437 |  | |
UniProt | |||||
Find proteins for O28835 (Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)) Explore O28835 Go to UniProtKB: O28835 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O28835 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.223
- R-Value Work: 0.183
- R-Value Observed: 0.185
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 74.9 | α = 90 |
| b = 84.027 | β = 90 |
| c = 44.175 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| SHELXD | phasing |
| MLPHARE | phasing |
| autoSHARP | phasing |
Entry History
Deposition Data
- Released Date: 2005-01-25 Deposition Author(s): Cuff, M.E., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2005-01-25
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2024-02-14
Changes: Data collection, Database references, Derived calculations
