Download MendeleyCrystal structure of axin dix domain
Shibata, N., Hanamura, T., Yamamoto, R., Ueda, Y., Yamamoto, H., Kikuchi, A., Higuchi, Y.To be published.
1WSP
Crystal structure of axin dix domain
- PDB DOI: https://doi.org/10.2210/pdb1WSP/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Rattus norvegicus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-11-08 Released: 2006-02-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.311
- R-Value Work: 0.246
- R-Value Observed: 0.246
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Axin 1 protein | 84 | Rattus norvegicus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for O70239 (Rattus norvegicus) Explore O70239 Go to UniProtKB: O70239 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O70239 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HG Query on HG | D [auth A] E [auth A] F [auth A] H [auth B] I [auth B] | MERCURY (II) ION Hg BQPIGGFYSBELGY-UHFFFAOYSA-N |  | ||
| BEZ Query on BEZ | G [auth A] | BENZOIC ACID C7 H6 O2 WPYMKLBDIGXBTP-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.311
- R-Value Work: 0.246
- R-Value Observed: 0.246
- Space Group: P 61
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 92.13 | α = 90 |
| b = 92.13 | β = 90 |
| c = 85.54 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| MOSFLM | data reduction |
| CCP4 | data scaling |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2006-02-14 Deposition Author(s): Shibata, N., Hanamura, T., Yamamoto, R., Ueda, Y., Yamamoto, H., Kikuchi, A., Higuchi, Y.
Revision History (Full details and data files)
- Version 1.0: 2006-02-14
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2024-03-13
Changes: Data collection, Database references, Derived calculations
