Download MendeleyAcetylornithine aminotransferase from thermus thermophilus HB8
Matsumura, M., Goto, M., Omi, R., Miyahara, I., Hirotsu, K.To be published.
1WKG
Acetylornithine aminotransferase from thermus thermophilus HB8
- PDB DOI: https://doi.org/10.2210/pdb1WKG/pdb
- Classification: TRANSFERASE
- Organism(s): Thermus thermophilus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-05-31 Released: 2005-09-27
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.25 Å
- R-Value Free: 0.289
- R-Value Work: 0.226
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Acetylornithine/acetyl-lysine aminotransferase | 395 | Thermus thermophilus | Mutation(s): 0 EC: 2.6.1.11 |  | |
UniProt | |||||
Find proteins for Q5SHH5 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SHH5 Go to UniProtKB: Q5SHH5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SHH5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| POI Query on POI | C [auth A], D [auth B] | N~2~-ACETYL-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-ORNITHINE C15 H24 N3 O8 P QIZZUQLTAZUUFQ-ZDUSSCGKSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.25 Å
- R-Value Free: 0.289
- R-Value Work: 0.226
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 71.27 | α = 90 |
| b = 69.79 | β = 90 |
| c = 140.5 | γ = 90 |
| Software Name | Purpose |
|---|---|
| AMoRE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2005-09-27 Deposition Author(s): Matsumura, M., Goto, M., Omi, R., Miyahara, I., Hirotsu, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2005-09-27
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2017-10-11
Changes: Refinement description - Version 1.4: 2024-03-13
Changes: Data collection, Database references, Derived calculations
