Download MendeleyCrystal structure of ttk003001606
Kaminishi, T., Sakai, H., Terada, T., Shirouzu, M., Yokoyama, S.To be published.
1WK4
Crystal structure of ttk003001606
- PDB DOI: https://doi.org/10.2210/pdb1WK4/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-05-30 Released: 2004-11-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.275
- R-Value Work: 0.217
- R-Value Observed: 0.217
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ttk003001606 | 174 | Thermus thermophilus HB8 | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q5SJ05 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SJ05 Go to UniProtKB: Q5SJ05 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SJ05 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MES Query on MES | D [auth A], E [auth B], F [auth C] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.275
- R-Value Work: 0.217
- R-Value Observed: 0.217
- Space Group: P 64
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 78.332 | α = 90 |
| b = 78.332 | β = 90 |
| c = 197.038 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2004-11-30 Deposition Author(s): Kaminishi, T., Sakai, H., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2004-11-30
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance
