Download MendeleyCrystal structure of GTP-binding protein TT1341 from Thermus thermophilus HB8
Kawazoe, M., Hori-Takemoto, C., Kaminishi, T., Sekine, S., Shirouzu, M., Yokoyama, S.To be published.
1WF3
Crystal structure of GTP-binding protein TT1341 from Thermus thermophilus HB8
- PDB DOI: https://doi.org/10.2210/pdb1WF3/pdb
- Classification: HYDROLASE
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2004-05-25 Released: 2004-11-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.88 Å
- R-Value Free: 0.227
- R-Value Work: 0.200
- R-Value Observed: 0.200
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GTP-binding protein | 301 | Thermus thermophilus HB8 | Mutation(s): 0 Gene Names: TT1341 |  | |
UniProt | |||||
Find proteins for Q5SM23 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SM23 Go to UniProtKB: Q5SM23 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SM23 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GNP Query on GNP | C [auth A] | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER C10 H17 N6 O13 P3 UQABYHGXWYXDTK-UUOKFMHZSA-N |  | ||
| GOL Query on GOL | D [auth A], E [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.88 Å
- R-Value Free: 0.227
- R-Value Work: 0.200
- R-Value Observed: 0.200
- Space Group: P 41
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 68.634 | α = 90 |
| b = 68.634 | β = 90 |
| c = 86.4 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| SOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2004-11-25 Deposition Author(s): Kawazoe, M., Hori-Takemoto, C., Kaminishi, T., Sekine, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2004-11-25
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.3: 2024-03-13
Changes: Data collection, Database references, Derived calculations
