1VJ2

Crystal structure of a novel family of manganese-containing cupin (tm1459) from thermotoga maritima at 1.65 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.208 
  • R-Value Observed: 0.210 

wwPDB Validation   3D Report Full Report


This is version 1.6 of the entry. See complete history


Literature

Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 A resolution.

Jaroszewski, L.Schwarzenbacher, R.von Delft, F.McMullan, D.Brinen, L.S.Canaves, J.M.Dai, X.Deacon, A.M.DiDonato, M.Elsliger, M.A.Eshagi, S.Floyd, R.Godzik, A.Grittini, C.Grzechnik, S.K.Hampton, E.Levin, I.Karlak, C.Klock, H.E.Koesema, E.Kovarik, J.S.Kreusch, A.Kuhn, P.Lesley, S.A.McPhillips, T.M.Miller, M.D.Morse, A.Moy, K.Ouyang, J.Page, R.Quijano, K.Reyes, R.Rezezadeh, F.Robb, A.Sims, E.Spraggon, G.Stevens, R.C.van den Bedem, H.Velasquez, J.Vincent, J.Wang, X.West, B.Wolf, G.Xu, Q.Hodgson, K.O.Wooley, J.Wilson, I.A.

(2004) Proteins 56: 611-614


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
novel manganese-containing cupin TM1459
A, B
126Thermotoga maritimaMutation(s): 0 
Gene Names: TM1459
UniProt
Find proteins for Q9X1H0 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
Explore Q9X1H0 
Go to UniProtKB:  Q9X1H0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9X1H0
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.208 
  • R-Value Observed: 0.210 
  • Space Group: P 32
  • Diffraction Data: https://doi.org/10.18430/M31VJ2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 52.55α = 90
b = 52.55β = 90
c = 96.267γ = 120
Software Package:
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
MOLREPphasing
REFMACrefinement
CCP4data scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2003-12-09
    Type: Initial release
  • Version 1.1: 2008-04-26
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-10-04
    Changes: Refinement description
  • Version 1.4: 2018-07-18
    Changes: Data collection, Database references
  • Version 1.5: 2023-01-25
    Changes: Database references, Derived calculations
  • Version 1.6: 2023-09-20
    Changes: Data collection, Refinement description