Download MendeleyCrystal structure of the uncharacterized protein ST2072 from Sulfolobus tokodaii
Tanabe, E., Horiike, Y., Tsumoto, K., Yasutake, Y., Yao, M., Tanaka, I., Kumagai, I.To be published.
1VE0
Crystal structure of uncharacterized protein ST2072 from Sulfolobus tokodaii
- PDB DOI: https://doi.org/10.2210/pdb1VE0/pdb
- Classification: METAL BINDING PROTEIN
- Organism(s): Sulfurisphaera tokodaii
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2004-03-26 Released: 2005-03-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.222
- R-Value Work: 0.181
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hypothetical protein (ST2072) | 134 | Sulfurisphaera tokodaii | Mutation(s): 3 Gene Names: ST2072 |  | |
UniProt | |||||
Find proteins for Q96YV5 (Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)) Explore Q96YV5 Go to UniProtKB: Q96YV5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q96YV5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | B [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| ZN Query on ZN | C [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.222
- R-Value Work: 0.181
- Space Group: P 21 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 71.72 | α = 90 |
| b = 71.72 | β = 90 |
| c = 71.72 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SOLVE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2005-03-22 Deposition Author(s): Tanabe, E., Horiike, Y., Tsumoto, K., Yasutake, Y., Yao, M., Tanaka, I., Kumagai, I.
Revision History (Full details and data files)
- Version 1.0: 2005-03-22
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2023-12-27
Changes: Data collection, Database references, Derived calculations
