Download MendeleyThe crystal structure of hypothetical protein PH1897 from Pyrococcus horikoshii with similarities for Inositol-1-monophosphatase.
Inagaki, E., Tahirov, T.H.To be published.
1VDW
A hypothetical protein PH1897 from Pyrococcus horikoshii with similarities for Inositol-1 monophosphatase
- PDB DOI: https://doi.org/10.2210/pdb1VDW/pdb
- Classification: structural genomics, unknown function
- Organism(s): Pyrococcus horikoshii
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-03-25 Released: 2004-04-06
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free: 0.217
- R-Value Work: 0.208
- R-Value Observed: 0.208
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hypothetical protein PH1897 | 254 | Pyrococcus horikoshii | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for O59523 (Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)) Explore O59523 Go to UniProtKB: O59523 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O59523 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | C [auth A] D [auth A] E [auth A] F [auth B] G [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free: 0.217
- R-Value Work: 0.208
- R-Value Observed: 0.208
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 47.989 | α = 90 |
| b = 89.762 | β = 90 |
| c = 120.576 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| BSS | data collection |
| SCALEPACK | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2004-04-06 Deposition Author(s): Inagaki, E., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2004-04-06
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
