Download MendeleyCrystal Analysis of Precorrin-8x Methyl Mutase from Thermus Thermophilus
Inagaki, E., Tahirov, T.H.To be published.
1V9C
Crystal Analysis of Precorrin-8x Methyl Mutase from Thermus Thermophilus
- PDB DOI: https://doi.org/10.2210/pdb1V9C/pdb
- Classification: ISOMERASE
- Organism(s): Thermus thermophilus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2004-01-23 Released: 2004-02-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.270
- R-Value Work: 0.221
- R-Value Observed: 0.223
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Precorrin-8x Methyl Mutase | 218 | Thermus thermophilus | Mutation(s): 0 EC: 5.4.1.2 |  | |
UniProt | |||||
Find proteins for P83848 (Thermus thermophilus) Explore P83848 Go to UniProtKB: P83848 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P83848 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | C [auth A], D [auth A], E [auth B], F [auth B], G [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| CL Query on CL | H [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.270
- R-Value Work: 0.221
- R-Value Observed: 0.223
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 54.571 | α = 90 |
| b = 67.822 | β = 113 |
| c = 56.697 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2004-02-10 Deposition Author(s): Inagaki, E., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2004-02-10
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
