Download MendeleyCrystal structure of the protein L1841, unknown member of enolase superfamily from Bradyrhizobium japonicum
Fedorov, A.A., Fedorov, E.V., Yew, W.S., Gerlt, J.A., Almo, S.C.To be published.
1TZZ
Crystal structure of the protein L1841, unknown member of enolase superfamily from Bradyrhizobium japonicum
- PDB DOI: https://doi.org/10.2210/pdb1TZZ/pdb
- Classification: structural genomics, unknown function
- Organism(s): Bradyrhizobium japonicum
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-07-12 Released: 2004-10-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.86 Å
- R-Value Free: 0.254
- R-Value Work: 0.234
- R-Value Observed: 0.238
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein L1841 | 392 | Bradyrhizobium japonicum | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q89FH0 (Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)) Explore Q89FH0 Go to UniProtKB: Q89FH0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q89FH0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | C [auth A], D [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.86 Å
- R-Value Free: 0.254
- R-Value Work: 0.234
- R-Value Observed: 0.238
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 95.975 | α = 90 |
| b = 178.003 | β = 90 |
| c = 110.519 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SOLVE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2004-10-05 Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Yew, W.S., Gerlt, J.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2004-10-05
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2021-02-03
Changes: Database references, Derived calculations, Structure summary - Version 1.4: 2024-02-14
Changes: Data collection, Database references
