1TUO

Crystal structure of putative phosphomannomutase from Thermus Thermophilus HB8

PDB DOI: https://doi.org/10.2210/pdb1TUO/pdb

Classification: BIOSYNTHETIC PROTEIN
Organism(s): Thermus thermophilus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2004-06-25 Released: 2005-08-09
Deposition Author(s): Misaki, S., Suzuki, S., Fujimoto, S., Sakurai, M., Kobayashi, M., Nishijima, K., Kunishima, N., Sugawara, M., Kuroishi, C., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.247
R-Value Work: 0.221

wwPDB Validation 3D Report Full Report

This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of putative phosphomannomutase from Thermus Thermophilus HB8

Misaki, S., Suzuki, S., Fujimoto, S., Sakurai, M., Kobayashi, M., Nishijima, K., Kunishima, N., Sugawara, M., Kuroishi, C.

To be published.

Macromolecule Content

Total Structure Weight: 50.31 kDa
Atom Count: 3,626
Modelled Residue Count: 437
Deposited Residue Count: 464
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative phosphomannomutase	A	464	Thermus thermophilus	Mutation(s): 0
UniProt
Find proteins for Q5SKJ3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SKJ3 Go to UniProtKB: Q5SKJ3
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q5SKJ3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.247
R-Value Work: 0.221
Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 106.61	α = 90
b = 55.048	β = 108.76
c = 83.763	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
SCALEPACK	data scaling
SOLVE	phasing
CNX	refinement
HKL-2000	data reduction

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2005-08-09

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2005-08-09
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2024-03-13
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.